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入门必看 深度解析长末端重复反转录转座子（LTR-RTs） 简书
1. LTR 与重复序列、转座子的关系 LTR-RTs 是 Long terminal repeat-retrotransposons 的缩写，中文名是长末端重复反转座子。LTR-RTs 名字中既有重复、又有转座子，那么它和重复序列、转座子是什么关系呢？图1 为您解答。转基因序列的两侧有长末端重复序列(long terminal repeat, LTR)，这有助于将转移质粒序列整合到宿主基因组中。 典型的是，在病毒转导过程中，LTRs之间的序列和包括LTRs在内的序列被整合到宿主基因组中。慢病毒包装（Lentiviral Guide）
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LTR_retriever: 一个更加准的LTR整合分析工具-CSDN博客
LTR_retriever不是一个独立的工具，他的主要作用就是整合 LTRharvest, LTR_FINDER, MGEScan 3.0.0, LTR_STRUC, 和 LtrDetector的结果，过滤其中的假阳性LTR-RT，得到高质量的LTR-RT库。由于LTR占据了基因组的大部分内容，因此可能直接导致大部分基因组的变异。我们发现，LTR插入时间与基因组大小显着负相关，这可能反映了每个基因组中LTR的插入和缺失之间的竞争，而且旧插入通常易于识别和消除。哪些因素对被子植物的基因组大小变化影响最大？,Ecology
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Amplification of LTRs of extrachromosomal linear DNAs (ALE
Extrachromosomal linear DNA (eclDNA) forms during LTR-RT replication; therefore, amplification LTRs of eclDNAs followed by sequencing (ALE-seq) uncover the current transpositional potential of the LTR-RTs.Metrics Abstract LTR retrotransposons (LTR-RTs) are ubiquitous and represent the dominant repeat element in plant genomes, playing important roles in functional variation, genome plasticity and...A comprehensive annotation dataset of intact LTR Nature
احصل على السعر
PlantLTRdb: An interactive database for 195 plant species LTR
LTR-retrotransposons (LTR-RTs) are a large group of transposable elements that replicate through an RNA intermediate and alter genome structure. The activities of LTR-RTs in plant genomes provide helpful information about genome evolution and gene function. LTR-RTs near or within genes can directly alter gene function.LTR retrotransposons are one of the main causes for plant genome size and structure evolution, along with polyploidy. The characterization of their amplification and subsequent elimination of the genomes is therefore a LTR retrotransposons in rice (Oryza sativa, L.): recent burst
احصل على السعر
A Highly Conserved, Small LTR Retrotransposon that
LTR retrotransposons are often the most abundant components of plant genomes and can impact gene and genome evolution. Most reported LTR retrotransposons are large elements (>4 kb) and are most often found in heterochromatic (gene poor) regions. We report the smallest LTR retrotransposon found to date, only 292 bp.The dynamics of long terminal repeat (LTR) retrotransposons and their contribution to genome evolution during plant speciation have remained largely unanswered. Here, we perform a genome-wide comparison of all eight Oryza AA-genome species, and identify 3911 intact LTR retrotransposons classified into 790 families.Rapid and Recent Evolution of LTR Retrotransposons Drives
احصل على السعر
入门必看 深度解析长末端重复反转录转座子（LTR-RTs） 简书
1. LTR 与重复序列、转座子的关系 LTR-RTs 是 Long terminal repeat-retrotransposons 的缩写，中文名是长末端重复反转座子。LTR-RTs 名字中既有重复、又有转座子，那么它和重复序列、转座子是什么关系呢？图1 为您解答。转基因序列的两侧有长末端重复序列(long terminal repeat, LTR)，这有助于将转移质粒序列整合到宿主基因组中。 典型的是，在病毒转导过程中，LTRs之间的序列和包括LTRs在内的序列被整合到宿主基因组中。慢病毒包装（Lentiviral Guide）
احصل على السعر
LTR_retriever: 一个更加准的LTR整合分析工具-CSDN博客
LTR_retriever不是一个独立的工具，他的主要作用就是整合 LTRharvest, LTR_FINDER, MGEScan 3.0.0, LTR_STRUC, 和 LtrDetector的结果，过滤其中的假阳性LTR-RT，得到高质量的LTR-RT库。由于LTR占据了基因组的大部分内容，因此可能直接导致大部分基因组的变异。我们发现，LTR插入时间与基因组大小显着负相关，这可能反映了每个基因组中LTR的插入和缺失之间的竞争，而且旧插入通常易于识别和消除。哪些因素对被子植物的基因组大小变化影响最大？,Ecology
احصل على السعر
Amplification of LTRs of extrachromosomal linear DNAs (ALE
Extrachromosomal linear DNA (eclDNA) forms during LTR-RT replication; therefore, amplification LTRs of eclDNAs followed by sequencing (ALE-seq) uncover the current transpositional potential of the LTR-RTs.Metrics Abstract LTR retrotransposons (LTR-RTs) are ubiquitous and represent the dominant repeat element in plant genomes, playing important roles in functional variation, genome plasticity and...A comprehensive annotation dataset of intact LTR Nature
احصل على السعر
PlantLTRdb: An interactive database for 195 plant species LTR
LTR-retrotransposons (LTR-RTs) are a large group of transposable elements that replicate through an RNA intermediate and alter genome structure. The activities of LTR-RTs in plant genomes provide helpful information about genome evolution and gene function. LTR-RTs near or within genes can directly alter gene function.LTR retrotransposons are one of the main causes for plant genome size and structure evolution, along with polyploidy. The characterization of their amplification and subsequent elimination of the genomes is therefore a LTR retrotransposons in rice (Oryza sativa, L.): recent burst
احصل على السعر
A Highly Conserved, Small LTR Retrotransposon that
LTR retrotransposons are often the most abundant components of plant genomes and can impact gene and genome evolution. Most reported LTR retrotransposons are large elements (>4 kb) and are most often found in heterochromatic (gene poor) regions. We report the smallest LTR retrotransposon found to date, only 292 bp.The dynamics of long terminal repeat (LTR) retrotransposons and their contribution to genome evolution during plant speciation have remained largely unanswered. Here, we perform a genome-wide comparison of all eight Oryza AA-genome species, and identify 3911 intact LTR retrotransposons classified into 790 families.Rapid and Recent Evolution of LTR Retrotransposons Drives
احصل على السعر
入门必看 深度解析长末端重复反转录转座子（LTR-RTs） 简书
1. LTR 与重复序列、转座子的关系 LTR-RTs 是 Long terminal repeat-retrotransposons 的缩写，中文名是长末端重复反转座子。LTR-RTs 名字中既有重复、又有转座子，那么它和重复序列、转座子是什么关系呢？图1 为您解答。转基因序列的两侧有长末端重复序列(long terminal repeat, LTR)，这有助于将转移质粒序列整合到宿主基因组中。 典型的是，在病毒转导过程中，LTRs之间的序列和包括LTRs在内的序列被整合到宿主基因组中。慢病毒包装（Lentiviral Guide）
احصل على السعر
LTR_retriever: 一个更加准的LTR整合分析工具-CSDN博客
LTR_retriever不是一个独立的工具，他的主要作用就是整合 LTRharvest, LTR_FINDER, MGEScan 3.0.0, LTR_STRUC, 和 LtrDetector的结果，过滤其中的假阳性LTR-RT，得到高质量的LTR-RT库。由于LTR占据了基因组的大部分内容，因此可能直接导致大部分基因组的变异。我们发现，LTR插入时间与基因组大小显着负相关，这可能反映了每个基因组中LTR的插入和缺失之间的竞争，而且旧插入通常易于识别和消除。哪些因素对被子植物的基因组大小变化影响最大？,Ecology
احصل على السعر
Amplification of LTRs of extrachromosomal linear DNAs (ALE
Extrachromosomal linear DNA (eclDNA) forms during LTR-RT replication; therefore, amplification LTRs of eclDNAs followed by sequencing (ALE-seq) uncover the current transpositional potential of the LTR-RTs.Metrics Abstract LTR retrotransposons (LTR-RTs) are ubiquitous and represent the dominant repeat element in plant genomes, playing important roles in functional variation, genome plasticity and...A comprehensive annotation dataset of intact LTR Nature
احصل على السعر
PlantLTRdb: An interactive database for 195 plant species LTR
LTR-retrotransposons (LTR-RTs) are a large group of transposable elements that replicate through an RNA intermediate and alter genome structure. The activities of LTR-RTs in plant genomes provide helpful information about genome evolution and gene function. LTR-RTs near or within genes can directly alter gene function.LTR retrotransposons are one of the main causes for plant genome size and structure evolution, along with polyploidy. The characterization of their amplification and subsequent elimination of the genomes is therefore a LTR retrotransposons in rice (Oryza sativa, L.): recent burst
احصل على السعر
A Highly Conserved, Small LTR Retrotransposon that
LTR retrotransposons are often the most abundant components of plant genomes and can impact gene and genome evolution. Most reported LTR retrotransposons are large elements (>4 kb) and are most often found in heterochromatic (gene poor) regions. We report the smallest LTR retrotransposon found to date, only 292 bp.The dynamics of long terminal repeat (LTR) retrotransposons and their contribution to genome evolution during plant speciation have remained largely unanswered. Here, we perform a genome-wide comparison of all eight Oryza AA-genome species, and identify 3911 intact LTR retrotransposons classified into 790 families.Rapid and Recent Evolution of LTR Retrotransposons Drives
احصل على السعر